Package: BayesNSGP 0.3.1
BayesNSGP: Bayesian Analysis of Non-Stationary Gaussian Process Models
Enables off-the-shelf functionality for fully Bayesian, nonstationary Gaussian process modeling. The approach to nonstationary modeling involves a closed-form, convolution-based covariance function with spatially-varying parameters; these parameter processes can be specified either deterministically (using covariates or basis functions) or stochastically (using approximate Gaussian processes). Stationary Gaussian processes are a special case of our methodology, and we furthermore implement approximate Gaussian process inference to account for very large spatial data sets (Finley, et al (2017) <doi:10.48550/arXiv.1702.00434>). Bayesian inference is carried out using Markov chain Monte Carlo methods via the "nimble" package, and posterior prediction for the Gaussian process at unobserved locations is provided as a post-processing step. Also provided are nearest-neighbor Gaussian process components for use directly in user-written model code, where the spatial process is retained as a latent field: neighbor-structure construction, a latent-field density and matching simulation function, a purpose-built Metropolis-Hastings sampler that updates the field one node at a time, and posterior prediction at unobserved locations.
Authors:
BayesNSGP_0.3.1.tar.gz
BayesNSGP_0.3.1.zip(r-4.7-any)BayesNSGP_0.3.1.zip(r-4.6-any)BayesNSGP_0.3.1.zip(r-4.5-any)
BayesNSGP_0.3.1.tgz(r-4.6-any)BayesNSGP_0.3.1.tgz(r-4.5-any)
BayesNSGP_0.3.1.tar.gz(r-4.7-any)BayesNSGP_0.3.1.tar.gz(r-4.6-any)
BayesNSGP_0.3.1.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
DESCRIPTION
card.svg |card.png
BayesNSGP/json (API)
| # Install 'BayesNSGP' in R: |
| install.packages('BayesNSGP', repos = c('https://danielturek.r-universe.dev', 'https://cloud.r-project.org')) |
This package does not link to any Github/Gitlab/R-forge repository. No issue tracker or development information is available.
Last updated from:7d166335eb. Checks:9 OK. Indexed: yes.
| Target | Result | Time | Files | Syslog |
|---|---|---|---|---|
| linux-devel | OK | 204 | ||
| source / vignettes | OK | 187 | ||
| linux-release | OK | 201 | ||
| macos-release | OK | 153 | ||
| macos-oldrel | OK | 170 | ||
| windows-devel | OK | 157 | ||
| windows-release | OK | 142 | ||
| windows-oldrel | OK | 110 | ||
| wasm-release | OK | 111 |
Exports:calcQFcalculateAD_nscalculateU_nscomputeADcomputeCcomputeNeighborscomputeQFconditionLatentObscrossCy_smCy_smdetermineNeighborsdisplayNeighborsdmnorm_gp2Scaledmnorm_NN_GPdmnorm_nngpdmnorm_sgvexpcovget_single_reverse_neighborsinverseEigenmatern_corrnimble_sparse_cholnimble_sparse_choleskynimble_sparse_crossprodnimble_sparse_solvenimble_sparse_solveMatnimble_sparse_tcrossprodNNGP.prednsCorrnsCrosscorrnsCrossdistnsCrossdist3dnsDistnsDist3dnsgpModelnsgpPredictorderCoordinatesMMDR_sparse_cholR_sparse_choleskyR_sparse_crossprodR_sparse_solveR_sparse_solveMatR_sparse_tcrossprodrmnorm_gp2Scalermnorm_NN_GPrmnorm_nngprmnorm_sgvRWNNGP_setupsampler_RW_NN_GPsgvSetup
Dependencies:classclassIntclicodacpp11DBIdplyre1071farverFNNgenericsggplot2gluegtableigraphisobandKernSmoothlabelinglatticelifecyclelpSolvemagrittrMatrixminqamitoolsnimblenumDerivpillarpkgconfigpracmaproxyR6RColorBrewerRcppRcppArmadillorlangs2S7scalessfStatMatchsurveysurvivaltibbletidyselectunitsutf8vctrsviridisLitewithrwk
